5HV9 Lyase date Jan 28, 2016
title Human Ltc4s Mutant-S36e
authors M.Thulasingam, H.R.S.Ahmad, A.Rinaldo-Matthis, J.Z.Haeggstrom
compound source
Molecule: Leukotriene C4 Synthase
Chain: A
Synonym: Ltc4 Synthase,Leukotriene-C(4) Synthase
Ec: 4.4.1.20
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ltc4s
Expression_system: Komagataella Pastoris Cbs 7435
Expression_system_taxid: 4922
symmetry Space Group: F 2 3
R_factor 0.289 R_Free 0.312
crystal
cell
length a length b length c angle alpha angle beta angle gamma
168.042 168.042 168.042 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand GSH, SO4 enzyme Lyase E.C.4.4.1.20 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione peroxidase activ...
  • enzyme activator activity


  • Primary referencePhosphorylation of Leukotriene C4 Synthase at Serine 36 Impairs Catalytic Activity., Ahmad S, Ytterberg AJ, Thulasingam M, Tholander F, Bergman T, Zubarev R, Wetterholm A, Rinaldo-Matthis A, Haeggstrom JZ, J Biol Chem. 2016 Jun 30. pii: jbc.M116.735647. PMID:27365393
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (5hv9.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 5HV9
  • CSU: Contacts of Structural Units for 5HV9
  • Structure Factors (75 Kb)
  • Retrieve 5HV9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HV9 from S2C, [Save to disk]
  • Re-refined 5hv9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HV9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HV9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hv9_A] [5hv9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HV9
  • Community annotation for 5HV9 at PDBWiki (http://pdbwiki.org)

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