5I0N Transferase date Feb 04, 2016
title Pi4k Iialpha Bound To Calcium
authors A.Baumlova, E.Boura
compound source
Molecule: Phosphatidylinositol 4-Kinase Type 2-Alpha,Lysozy Phosphatidylinositol 4-Kinase Type 2-Alpha;
Chain: A
Synonym: Phosphatidylinositol 4-Kinase Type II-Alpha, Phosphatidylinositol 4-Kinase Type II-Alpha;
Ec: 2.7.1.67,3.2.1.17,2.7.1.67
Engineered: Yes
Organism_scientific: Homo Sapiens, Enterobacteria Phage T4
Organism_common: Human
Organism_taxid: 9606, 10665
Gene: Pi4k2a, E, T4tp126
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.219 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.882 102.028 78.929 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.28 Å
ligand ATP, CA enzyme Transferase E.C.2.7.1.67 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (5i0n.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 5I0N
  • CSU: Contacts of Structural Units for 5I0N
  • Structure Factors (266 Kb)
  • Retrieve 5I0N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I0N from S2C, [Save to disk]
  • Re-refined 5i0n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5I0N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5I0N
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5i0n from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i0n_A] [5i0n]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5I0N
  • Community annotation for 5I0N at PDBWiki (http://pdbwiki.org)

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