5I6R Signaling Protein date Feb 16, 2016
title Crystal Structure Of Srgap2 F-Barx Wt Form-1
authors M.Sporny, J.Guez-Haddad, M.N.Isupov, Y.Opatowsky
compound source
Molecule: Slit-Robo Rho Gtpase-Activating Protein 2
Chain: A
Synonym: Srgap2,Formin-Binding Protein 2,Rho Gtpase-Activat Protein 34;
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Srgap2, Arhgap34, Fnbp2, Kiaa0456, Srgap2a
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Phis Parallel
symmetry Space Group: P 1 2 1
R_factor 0.203 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
93.300 29.760 94.630 90.00 92.99 90.00
method X-Ray Diffractionresolution 2.15 Å
ligand ACT, MLT, PGE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (5i6r.pdb1.gz) 159 Kb
  • LPC: Ligand-Protein Contacts for 5I6R
  • CSU: Contacts of Structural Units for 5I6R
  • Structure Factors (1832 Kb)
  • Retrieve 5I6R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5I6R from S2C, [Save to disk]
    • View 5I6R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5I6R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5i6r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5I6R
  • Community annotation for 5I6R at PDBWiki (http://pdbwiki.org)

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