5IBT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL enzyme
Primary referenceInfluenza immunization elicits antibodies specific for an egg-adapted vaccine strain., Raymond DD, Stewart SM, Lee J, Ferdman J, Bajic G, Do KT, Ernandes MJ, Suphaphiphat P, Settembre EC, Dormitzer PR, Del Giudice G, Finco O, Kang TH, Ippolito GC, Georgiou G, Kepler TB, Haynes BF, Moody MA, Liao HX, Schmidt AG, Harrison SC, Nat Med. 2016 Dec;22(12):1465-1469. doi: 10.1038/nm.4223. Epub 2016 Nov 7. PMID:27820604
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk]
  • Biological Unit Coordinates (5ibt.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 5IBT
  • CSU: Contacts of Structural Units for 5IBT
  • Structure Factors (168 Kb)
  • Retrieve 5IBT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IBT from S2C, [Save to disk]
  • Re-refined 5ibt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IBT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ibt] [5ibt_H] [5ibt_L]
  • SWISS-PROT database:
  • Domains found in 5IBT: [IG_like] [IGv ] by SMART

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