5ID3 Transport Protein date Feb 23, 2016
title Solution Structure Of The Pore-Forming Region Of C. Elegans Mitochondrial Calcium Uniporter (Mcu)
authors K.Oxenoid, Y.Dong, C.Cao, T.Cui, Y.Sancak, A.L.Markhard, Z.Grabare Z.Liu, B.Ouyang, Y.Cong, V.K.Mootha, J.J.Chou, Membrane Protein Structures By Solution Nmr (Mpsbynmr)
compound source
Molecule: Mitochondrial Calcium Uniporter
Chain: A, B, C, D, E
Fragment: Unp Residues 167-318
Engineered: Yes
Mutation: Yes
Organism_scientific: Caenorhabditis Elegans
Organism_taxid: 6239
Gene: Mcu-1, Cele_k02b2.3, K02b2.3
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Pet21a
methodSolution NMR
Gene CELE
Primary referenceArchitecture of the mitochondrial calcium uniporter., Oxenoid K, Dong Y, Cao C, Cui T, Sancak Y, Markhard AL, Grabarek Z, Kong L, Liu Z, Ouyang B, Cong Y, Mootha VK, Chou JJ, Nature. 2016 May 2;533(7602):269-73. doi: 10.1038/nature17656. PMID:27135929
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3216 Kb) [Save to disk]
  • Biological Unit Coordinates (5id3.pdb1.gz) 216 Kb
  • CSU: Contacts of Structural Units for 5ID3
  • Original NMR restraints for 5ID3 from PDB
  • Retrieve 5ID3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ID3 from S2C, [Save to disk]
  • View 5ID3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ID3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5id3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5id3_D] [5id3_B] [5id3_C] [5id3_A] [5id3] [5id3_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ID3
  • Community annotation for 5ID3 at PDBWiki (http://pdbwiki.org)

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