5IH2 Signaling Protein date Feb 28, 2016
title Structure, Thermodynamics, And The Role Of Conformational Dy The Interactions Between The N-Terminal Sh3 Domain Of Crkii Proline-Rich Motifs In Cabl
authors V.S.Bhatt, D.Zeng, I.Krieger, J.C.Sacchettini, J.H.Cho
compound source
Molecule: Adapter Molecule Crk
Chain: A, B
Fragment: Unp Residues 134-191
Synonym: Proto-Oncogene C-Crk,P38
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Crk, Crko
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Proline Rich Peptide
Chain: M, N
Engineered: Yes
Synthetic: Yes
Organism_scientific: Endothia Gyrosa
Organism_taxid: 40263
symmetry Space Group: P 1 21 1
R_factor 0.170 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.222 29.479 45.756 90.00 94.31 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACE, NA, NH2, P4G, PEG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (5ih2.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (5ih2.pdb2.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 5IH2
  • CSU: Contacts of Structural Units for 5IH2
  • Structure Factors (353 Kb)
  • Retrieve 5IH2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IH2 from S2C, [Save to disk]
  • Re-refined 5ih2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IH2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5IH2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d5ih2, region H:114-214 [Jmol] [rasmolscript] [script source]
        - Domain d1s5ih2, region H:114-230 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ih2_N] [5ih2] [5ih2_B] [5ih2_A] [5ih2_M]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5IH2: [SH3 ] by SMART
    • Other resources with information on 5IH2
  • Community annotation for 5IH2 at PDBWiki (http://pdbwiki.org)

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