5IHI Structural Protein date Feb 29, 2016
title Crystal Structure Of The Alpha Spectrin Sh3 Domain Double Mu D48g
authors A.Camara-Artigas
compound source
Molecule: Spectrin Alpha Chain, Non-Erythrocytic 1
Chain: A
Fragment: Sh3 Domain
Synonym: Alpha-II Spectrin,Fodrin Alpha Chain
Engineered: Yes
Other_details: Sh3 Domain
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Sptan1, Spta2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet26
symmetry Space Group: P 21 21 21
R_factor 0.168 R_Free 0.193
crystal
cell
length a length b length c angle alpha angle beta angle gamma
33.219 42.315 49.391 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand PEG, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (5ihi.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 5IHI
  • CSU: Contacts of Structural Units for 5IHI
  • Structure Factors (261 Kb)
  • Retrieve 5IHI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IHI from S2C, [Save to disk]
  • Re-refined 5ihi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IHI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5IHI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ihi_A] [5ihi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5IHI
  • Community annotation for 5IHI at PDBWiki (http://pdbwiki.org)

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