5IIL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8OG, CIT, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA fidelity mechanism in DNA polymerase lambda promotes error-free bypass of 8-oxo-dG., Burak MJ, Guja KE, Hambardjieva E, Derkunt B, Garcia-Diaz M, EMBO J. 2016 Aug 1. pii: e201694332. PMID:27481934
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (5iil.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 5IIL
  • CSU: Contacts of Structural Units for 5IIL
  • Structure Factors (727 Kb)
  • Retrieve 5IIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IIL from S2C, [Save to disk]
  • Re-refined 5iil structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5IIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5iil] [5iil_A] [5iil_D] [5iil_P] [5iil_T]
  • SWISS-PROT database:
  • Domains found in 5IIL: [HhH1] [POLXc ] by SMART

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