5IJS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5JK, 6BR, CA, IOD, NA, NAG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • phosphodiesterase I activity...
  • scavenger receptor activity


  • Primary referenceStructural snapshots of the catalytic cycle of the phosphodiesterase Autotaxin., Hausmann J, Keune WJ, Hipgrave Ederveen AL, van Zeijl L, Joosten RP, Perrakis A, J Struct Biol. 2016 Jun 4. pii: S1047-8477(16)30108-3. doi:, 10.1016/j.jsb.2016.06.002. PMID:27268273
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk]
  • Biological Unit Coordinates (5ijs.pdb1.gz) 266 Kb
  • LPC: Ligand-Protein Contacts for 5IJS
  • CSU: Contacts of Structural Units for 5IJS
  • Structure Factors (2104 Kb)
  • Retrieve 5IJS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IJS from S2C, [Save to disk]
  • Re-refined 5ijs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IJS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ijs] [5ijs_A]
  • SWISS-PROT database:
  • Domains found in 5IJS: [Endonuclease_NS] [NUC] [SO ] by SMART

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