5IKW Transferase Transferase Inhibitor date Mar 04, 2016
title Crystal Structure Of Bmp-2-Inducible Kinase In Complex With Indazole Inhibitor
authors R.M.Counago, F.J.Sorrell, T.Krojer, P.Savitsky, J.M.Elkins, A.Axt D.Drewry, C.Wells, C.Zhang, W.Zuercher, T.M.Willson, C.H.Arrowsm A.M.Edwards, C.Bountra, P.Arruda, O.Gileadi, Structural Genomic Consortium (Sgc)
compound source
Molecule: Bmp-2-Inducible Protein Kinase
Chain: A
Fragment: Unp Residues 38-345
Synonym: Bike
Ec: 2.7.11.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bmp2k, Bike, Hrihfb2017
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: I 2 2 2
R_factor 0.176 R_Free 0.216
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.957 111.155 164.053 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.41 Å
ligand 6BU enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (5ikw.pdb1.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 5IKW
  • CSU: Contacts of Structural Units for 5IKW
  • Structure Factors (950 Kb)
  • Retrieve 5IKW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IKW from S2C, [Save to disk]
  • Re-refined 5ikw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IKW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5IKW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5ikw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ikw_A] [5ikw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5IKW: [STYKc ] by SMART
  • Other resources with information on 5IKW
  • Community annotation for 5IKW at PDBWiki (http://pdbwiki.org)

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