5IL2 Rna Binding Protein date Mar 04, 2016
title Crystal Structure Of Sah-Bound Mettl3-Mettl14 Complex
authors X.Wang, Z.Guan, T.Zou, P.Yin
compound source
Molecule: Mettl3
Chain: A
Fragment: Unp Residues 369-580
Synonym: Mt-A70,Methyltransferase-Like Protein 3
Ec: 2.1.1.62
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mettl3
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108

Molecule: Mettl14
Chain: B
Fragment: Unp Residues 109-408
Synonym: Methyltransferase-Like Protein 14
Ec: 2.1.1.62
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mettl14
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
symmetry Space Group: P 41 21 2
R_factor 0.185 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.865 101.865 115.835 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.61 Å
ligand EDO, SAH, SEP enzyme Transferase E.C.2.1.1.62 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (5il2.pdb1.gz) 175 Kb
  • LPC: Ligand-Protein Contacts for 5IL2
  • CSU: Contacts of Structural Units for 5IL2
  • Structure Factors (1674 Kb)
  • Retrieve 5IL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IL2 from S2C, [Save to disk]
  • Re-refined 5il2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5IL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5IL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d5il2, region L:108-211 [Jmol] [rasmolscript] [script source]
        - Domain d1s5il2, region L:108-214 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5il2_B] [5il2_A] [5il2]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5IL2
  • Community annotation for 5IL2 at PDBWiki (http://pdbwiki.org)

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