5IS5	Transferase	date	Mar 15, 2016
title	Discovery And Pharmacological Characterization Of Novel Quin Based Pi3k Delta-Selective Inhibitors
authors	S.Gutmann, G.Rummel, B.Shrestha
compound		source
Molecule: Phosphatidylinositol 4,5-Bisphosphate 3-Kinase Ca Subunit Delta Isoform; Chain: A Ec: 2.7.1.153 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Pik3cd Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21
symmetry	Space Group: C 1 2 1	R_factor 0.229 R_Free 0.271
crystal cell	length a length b length c angle alpha angle beta angle gamma 141.460 64.320 116.640 90.00 103.20 90.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	6CY	enzyme	Transferase E.C.2.7.1.153 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery and Pharmacological Characterization of Novel Quinazoline-Based PI3K Delta-Selective Inhibitors., Hoegenauer K, Soldermann N, Stauffer F, Furet P, Graveleau N, Smith AB, Hebach C, Hollingworth GJ, Lewis I, Gutmann S, Rummel G, Knapp M, Wolf RM, Blanz J, Feifel R, Burkhart C, Zecri F, ACS Med Chem Lett. 2016 Jun 2;7(8):762-7. doi: 10.1021/acsmedchemlett.6b00119., eCollection 2016 Aug 11. PMID:27563400

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk] Biological Unit Coordinates (5is5.pdb1.gz) 238 Kb LPC: Ligand-Protein Contacts for 5IS5 CSU: Contacts of Structural Units for 5IS5 Structure Factors (209 Kb) Retrieve 5IS5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5IS5 from S2C, [Save to disk] Re-refined 5is5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5IS5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5IS5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5is5_A] [5is5] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5IS5: [PI3K_C2] [PI3K_p85B] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART

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