5J20 Chaperone date Mar 29, 2016
title Hsp90 In Complex With 5-[4-(2-Fluoro-Phenyl)-5-Oxo-4,5-Dihyd 2,4]Triazol-3-Yl]-N-Furan-2-Ylmethyl-2,4-Dihydroxy-N-Methyl
authors M.Amaral, P.Matias
compound source
Molecule: Heat Shock Protein Hsp 90-Alpha
Chain: A
Synonym: Heat Shock 86 Kda,Hsp86,Lipopolysaccharide-Associa Protein 2,Lps-Associated Protein 2,Renal Carcinoma Antigen
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsp90aa1, Hsp90a, Hspc1, Hspca
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.197 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.919 88.660 97.882 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand 6FJ enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProtein conformational flexibility modulates kinetics and thermodynamics of drug binding., Amaral M, Kokh DB, Bomke J, Wegener A, Buchstaller HP, Eggenweiler HM, Matias P, Sirrenberg C, Wade RC, Frech M, Nat Commun. 2017 Dec 22;8(1):2276. doi: 10.1038/s41467-017-02258-w. PMID:29273709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (5j20.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 5J20
  • CSU: Contacts of Structural Units for 5J20
  • Structure Factors (769 Kb)
  • Retrieve 5J20 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5J20 from S2C, [Save to disk]
  • View 5J20 in 3D
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  • Visual 3D analysis of 5J20
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5j20_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5J20
  • Community annotation for 5J20 at PDBWiki (http://pdbwiki.org)

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