5J3S	Hydrolase	date	Mar 31, 2016
title	Crystal Structure Of The Catalytic Domain Of Human Tyrosyl D Phosphodiesterase 2 In Complex With A Small Molecule Inhibi
authors	P.Hornyak, L.H.Pearl, K.W.Caldecott, A.W.Oliver
compound		source
Molecule: Tyrosyl-Dna Phosphodiesterase 2 Chain: A Synonym: Htdp2,5'-Tyrosyl-Dna Phosphodiesterase,5'-Tyr-Dna Phosphodiesterase,Ets1-Associated Protein 2,Ets1-Associated II,Eapii,Traf And Tnf Receptor-Associated Protein,Tyrosyl-R Phosphodiesterase,Vpg Unlinkase; Ec: 3.1.4.- Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tdp2, Eap2, Ttrap, Ad-022 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: B834(De3)
symmetry	Space Group: P 65 2 2	R_factor 0.254 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.516 68.516 209.505 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.40 Å
ligand	6FQ	enzyme	Hydrolase E.C.3.1.4 BRENDA
Primary reference	Mode of action of DNA-competitive small molecule inhibitors of tyrosyl DNA phosphodiesterase 2., Hornyak P, Askwith T, Walker S, Komulainen E, Paradowski M, Pennicott LE, Bartlett EJ, Brissett NC, Raoof A, Watson M, Jordan AM, Ogilvie DJ, Ward SE, Atack JR, Pearl LH, Caldecott KW, Oliver AW, Biochem J. 2016 Apr 20. pii: BCJ20160180. PMID:27099339

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (5j3s.pdb1.gz) 76 Kb LPC: Ligand-Protein Contacts for 5J3S CSU: Contacts of Structural Units for 5J3S Structure Factors (87 Kb) Retrieve 5J3S in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J3S from S2C, [Save to disk] Re-refined 5j3s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j3s] [5j3s_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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