5J5Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	6G6, GOL	enzyme
Gene Ontology	Chain Function Process Component D, C, B, A
Primary reference	mRNA cap analogues substituted in the tetraphosphate chain with CX2: identification of O-to-CCl2 as the first bridging modification that confers resistance to decapping without impairing translation., Rydzik AM, Warminski M, Sikorski PJ, Baranowski MR, Walczak S, Kowalska J, Zuberek J, Lukaszewicz M, Nowak E, W Claridge TD, Darzynkiewicz E, Nowotny M, Jemielity J, Nucleic Acids Res. 2017 Sep 6;45(15):8661-8675. doi: 10.1093/nar/gkx569. PMID:28666355

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk] Biological Unit Coordinates (5j5y.pdb1.gz) 65 Kb Biological Unit Coordinates (5j5y.pdb2.gz) 66 Kb Biological Unit Coordinates (5j5y.pdb3.gz) 52 Kb Biological Unit Coordinates (5j5y.pdb4.gz) 55 Kb LPC: Ligand-Protein Contacts for 5J5Y CSU: Contacts of Structural Units for 5J5Y Structure Factors (666 Kb) Retrieve 5J5Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J5Y from S2C, [Save to disk]

View 5J5Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j5y] [5j5y_A] [5j5y_B] [5j5y_C] [5j5y_D] SWISS-PROT database:

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