5J7E Transport Protein date Apr 06, 2016
title Heag Pas Domain
authors T.Xue, S.Juan, Q.Xiaohong
compound source
Molecule: Potassium Voltage-Gated Channel Subfamily H Membe
Chain: A, B, C, D, E, F
Fragment: Pas Domain, Unp Residues 1-146
Synonym: Heag1,H-Eag,Ether-A-Go-Go Potassium Channel 1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kcnh1, Eag, Eag1
Expression_system: Escherichia Coli-Pichia Pastoris Shuttle Pppkan_alpha_s;
Expression_system_taxid: 1182039
symmetry Space Group: C 1 2 1
R_factor 0.214 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
213.974 39.058 106.802 90.00 118.03 90.00
method X-Ray Diffractionresolution 1.90 Å
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (5j7e.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (5j7e.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (5j7e.pdb3.gz) 19 Kb
  • Biological Unit Coordinates (5j7e.pdb4.gz) 19 Kb
  • Biological Unit Coordinates (5j7e.pdb5.gz) 19 Kb
  • Biological Unit Coordinates (5j7e.pdb6.gz) 19 Kb
  • CSU: Contacts of Structural Units for 5J7E
  • Structure Factors (835 Kb)
  • Retrieve 5J7E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5J7E from S2C, [Save to disk]
  • Re-refined 5j7e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5J7E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5J7E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5j7e_B] [5j7e_A] [5j7e_E] [5j7e_F] [5j7e_C] [5j7e_D] [5j7e]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 5J7E: [PAC] [PAS ] by SMART
  • Other resources with information on 5J7E
  • Community annotation for 5J7E at PDBWiki (http://pdbwiki.org)

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