5J8R	Hydrolase	date	Apr 08, 2016
title	Crystal Structure Of The Catalytic Domain Of Human Protein T Phosphatase Non-Receptor Type 12 - K61r Mutant
authors	H.Li, F.Yang, Y.F.Xu, W.J.Wang, P.Xiao, X.Yu, J.P.Sun
compound		source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 12 Chain: A, B, C, D Fragment: Unp Residues 1-305 Synonym: Ptp-Pest,Protein-Tyrosine Phosphatase G1,Ptpg1 Ec: 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptpn12 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: H 3	R_factor 0.239 R_Free 0.275
crystal cell	length a length b length c angle alpha angle beta angle gamma 129.938 129.938 278.757 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.04 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk] Biological Unit Coordinates (5j8r.pdb1.gz) 198 Kb CSU: Contacts of Structural Units for 5J8R Structure Factors (1704 Kb) Retrieve 5J8R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J8R from S2C, [Save to disk] Re-refined 5j8r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5J8R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5J8R

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j8r_B] [5j8r_A] [5j8r_C] [5j8r_D] [5j8r] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 5J8R: [PTPc ] by SMART

Other resources with information on 5J8R

Community annotation for 5J8R at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---