5JDU		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, GOL, NAG	enzyme
Gene Ontology	Chain Function Process Component A, C B, D
Primary reference	Loop Electrostatics Asymmetry Modulates the Preexisting Conformational Equilibrium in Thrombin., Pozzi N, Zerbetto M, Acquasaliente L, Tescari S, Frezzato D, Polimeno A, Gohara DW, Di Cera E, De Filippis V, Biochemistry. 2016 Jul 6. PMID:27347732

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk] Biological Unit Coordinates (5jdu.pdb1.gz) 103 Kb Biological Unit Coordinates (5jdu.pdb2.gz) 106 Kb LPC: Ligand-Protein Contacts for 5JDU CSU: Contacts of Structural Units for 5JDU Structure Factors (1568 Kb) Retrieve 5JDU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JDU from S2C, [Save to disk] Re-refined 5jdu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JDU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jdu] [5jdu_A] [5jdu_B] [5jdu_C] [5jdu_D] SWISS-PROT database: Domain found in 5JDU: [Tryp_SPc ] by SMART

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