5JHQ Transferase date Apr 21, 2016
title Arcs 1-3 Of Human Tankyrase-1 Bound To A Peptide Derived Fro
authors T.Eisemann, J.M.Pascal
compound source
Molecule: Tankyrase-1
Chain: A, B, C, D
Fragment: Unp Residues 174-649
Synonym: Tank1,Adp-Ribosyltransferase Diphtheria Toxin-Like Poly [Adp-Ribose] Polymerase 5a,Tnks-1,Trf1-Interacting Ank Related Adp-Ribose Polymerase,Tankyrase I;
Ec: 2.4.2.30
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnks, Parp5a, Parpl, Tin1, Tinf1, Tnks1
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Peptide Derived From Insulin-Responsive Aminopept (Irap);
Chain: E, F, G, H, I, J, K, L
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.214 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.510 129.830 123.950 90.00 92.31 90.00
method X-Ray Diffractionresolution 3.20 Å
ligand
enzyme Transferase E.C.2.4.2.30 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceTankyrase-1 Ankyrin Repeats Form an Adaptable Binding Platform for Targets of ADP-Ribose Modification., Eisemann T, McCauley M, Langelier MF, Gupta K, Roy S, Van Duyne GD, Pascal JM, Structure. 2016 Sep 1. pii: S0969-2126(16)30225-8. doi:, 10.1016/j.str.2016.07.014. PMID:27594684
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (625 Kb) [Save to disk]
  • Biological Unit Coordinates (5jhq.pdb1.gz) 157 Kb
  • Biological Unit Coordinates (5jhq.pdb2.gz) 158 Kb
  • Biological Unit Coordinates (5jhq.pdb3.gz) 157 Kb
  • Biological Unit Coordinates (5jhq.pdb4.gz) 156 Kb
  • CSU: Contacts of Structural Units for 5JHQ
  • Structure Factors (3242 Kb)
  • Retrieve 5JHQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JHQ from S2C, [Save to disk]
  • Re-refined 5jhq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JHQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JHQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jhq_K] [5jhq_H] [5jhq_G] [5jhq_E] [5jhq_I] [5jhq] [5jhq_A] [5jhq_F] [5jhq_L] [5jhq_J] [5jhq_C] [5jhq_B] [5jhq_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5JHQ: [ANK ] by SMART
  • Other resources with information on 5JHQ
  • Community annotation for 5JHQ at PDBWiki (http://pdbwiki.org)

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