5JJD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PEG, PGE enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceInteraction between the PH and START domains of ceramide transfer protein competes with phosphatidylinositol 4-phosphate binding by the PH domain., Prashek J, Bouyain S, Fu M, Li Y, Berkes D, Yao X, J Biol Chem. 2017 Aug 25;292(34):14217-14228. doi: 10.1074/jbc.M117.780007. Epub , 2017 Jun 26. PMID:28652409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (5jjd.pdb1.gz) 165 Kb
  • LPC: Ligand-Protein Contacts for 5JJD
  • CSU: Contacts of Structural Units for 5JJD
  • Structure Factors (98 Kb)
  • Retrieve 5JJD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JJD from S2C, [Save to disk]
  • Re-refined 5jjd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JJD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jjd_A] [5jjd_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science