5JJX Immune System date Apr 25, 2016
title Crystal Structure Of The Hat Domain Of Sart3
authors A.Dong, Q.Zhang, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards Structural Genomics Consortium (Sgc)
compound source
Molecule: Squamous Cell Carcinoma Antigen Recognized By T-C
Chain: A
Synonym: Sart-3,Tat-Interacting Protein Of 110 Kda,Tip110,P Nuclear Rna-Binding Protein;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sart3, Kiaa0156, Tip110
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21-Codonplus-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Mhl
symmetry Space Group: P 63
R_factor 0.207 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.113 135.113 43.210 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand CL, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (5jjx.pdb1.gz) 52 Kb
  • Biological Unit Coordinates (5jjx.pdb2.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 5JJX
  • CSU: Contacts of Structural Units for 5JJX
  • Structure Factors (4732 Kb)
  • Retrieve 5JJX in mmCIF format [Save to disk]
  • Re-refined 5jjx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JJX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JJX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5jjx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jjx] [5jjx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5JJX: [HAT ] by SMART
  • Other resources with information on 5JJX
  • Community annotation for 5JJX at PDBWiki (http://pdbwiki.org)

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