5JK7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, G


E, C


F, H


Primary referenceThe DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction., Wu Y, Zhou X, Barnes CO, DeLucia M, Cohen AE, Gronenborn AM, Ahn J, Calero G, Nat Struct Mol Biol. 2016 Aug 29. doi: 10.1038/nsmb.3284. PMID:27571178
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1187 Kb) [Save to disk]
  • Biological Unit Coordinates (5jk7.pdb1.gz) 598 Kb
  • Biological Unit Coordinates (5jk7.pdb2.gz) 590 Kb
  • CSU: Contacts of Structural Units for 5JK7
  • Structure Factors (2135 Kb)
  • Retrieve 5JK7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JK7 from S2C, [Save to disk]
  • Re-refined 5jk7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JK7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jk7] [5jk7_A] [5jk7_B] [5jk7_C] [5jk7_D] [5jk7_E] [5jk7_F] [5jk7_G] [5jk7_H]
  • SWISS-PROT database:
  • Domains found in 5JK7: [UDG] [UreE_C ] by SMART

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