5JKB Cell Adhesion date Apr 26, 2016
title Crystal Structure Of Human Juno (Crystal Form 2)
authors U.Ohto, H.Ishida, T.Shimizu
compound source
Molecule: Sperm-Egg Fusion Protein Juno
Chain: A, B, C, D
Synonym: Folate Receptor 4,Folate Receptor Delta,Fr-Delta,I Receptor Protein Juno;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Izumo1r, Folr4, Juno
Expression_system: Drosophila
Expression_system_taxid: 7215
symmetry Space Group: I 1 2 1
R_factor 0.216 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.770 88.579 108.132 90.00 96.88 90.00
method X-Ray Diffractionresolution 3.23 Å
ligand CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk]
  • Biological Unit Coordinates (5jkb.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (5jkb.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (5jkb.pdb3.gz) 68 Kb
  • Biological Unit Coordinates (5jkb.pdb4.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 5JKB
  • CSU: Contacts of Structural Units for 5JKB
  • Structure Factors (310 Kb)
  • Retrieve 5JKB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JKB from S2C, [Save to disk]
  • Re-refined 5jkb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JKB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5JKB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jkb_D] [5jkb_A] [5jkb_C] [5jkb_B] [5jkb]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5JKB
  • Community annotation for 5JKB at PDBWiki (http://pdbwiki.org)

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