5JMF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, MG, MLY, TRS	enzyme
Gene	BT
Gene Ontology	Chain Function Process Component A
Primary reference	Conformational Flexibility of PL12 family Heparinases: Structure and Substrate Specificity of Heparinase III from Bacteroides thetaiotaomicron (BT4657)., Ulaganathan T, Shi R, Yao D, Gu RX, Garron ML, Cherney M, Tieleman DP, Sterner E, Li G, Li L, Linhardt RJ, Cygler M, Glycobiology. 2016 Sep 12. pii: cww096. PMID:27621378

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk] Biological Unit Coordinates (5jmf.pdb1.gz) 228 Kb LPC: Ligand-Protein Contacts for 5JMF CSU: Contacts of Structural Units for 5JMF Structure Factors (473 Kb) Retrieve 5JMF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JMF from S2C, [Save to disk] Re-refined 5jmf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JMF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jmf] [5jmf_A] SWISS-PROT database:

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