5JN8 Lyase Lyase Inhibitor date Apr 29, 2016
title Crystal Structure For The Complex Of Human Carbonic Anhydras Acetazolamide
authors Z.Chen, A.Waheed, E.Di Cera, W.S.Sly
compound source
Molecule: Carbonic Anhydrase 4
Chain: A, B, C, D
Synonym: Carbonate Dehydratase Iv,Carbonic Anhydrase Iv,Ca-
Ec: 4.2.1.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca4
Expression_system: Cricetulus Griseus
Expression_system_taxid: 10029
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.933 123.471 151.237 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand ACT, AZM, GOL, SO4, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structure of the secretory form of membrane-associated human carbonic anhydrase IV at 2.8-A resolution., Stams T, Nair SK, Okuyama T, Waheed A, Sly WS, Christianson DW, Proc Natl Acad Sci U S A. 1996 Nov 26;93(24):13589-94. PMID:8942978
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (390 Kb) [Save to disk]
  • Biological Unit Coordinates (5jn8.pdb1.gz) 98 Kb
  • Biological Unit Coordinates (5jn8.pdb2.gz) 96 Kb
  • Biological Unit Coordinates (5jn8.pdb3.gz) 100 Kb
  • Biological Unit Coordinates (5jn8.pdb4.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 5JN8
  • CSU: Contacts of Structural Units for 5JN8
  • Structure Factors (2172 Kb)
  • Retrieve 5JN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JN8 from S2C, [Save to disk]
  • Re-refined 5jn8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5JN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5JN8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jn8_B] [5jn8_C] [5jn8_A] [5jn8_D] [5jn8]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5JN8
  • Community annotation for 5JN8 at PDBWiki (http://pdbwiki.org)

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