5JOF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4	enzyme
Primary reference	Somatic Hypermutation-Induced Changes in the Structure and Dynamics of HIV-1 Broadly Neutralizing Antibodies., Davenport TM, Gorman J, Joyce MG, Zhou T, Soto C, Guttman M, Moquin S, Yang Y, Zhang B, Doria-Rose NA, Hu SL, Mascola JR, Kwong PD, Lee KK, Structure. 2016 Jul 20. pii: S0969-2126(16)30139-3. doi:, 10.1016/j.str.2016.06.012. PMID:27477385

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (562 Kb) [Save to disk] Biological Unit Coordinates (5jof.pdb1.gz) 141 Kb Biological Unit Coordinates (5jof.pdb2.gz) 208 Kb Biological Unit Coordinates (5jof.pdb3.gz) 142 Kb Biological Unit Coordinates (5jof.pdb4.gz) 74 Kb LPC: Ligand-Protein Contacts for 5JOF CSU: Contacts of Structural Units for 5JOF Structure Factors (732 Kb) Retrieve 5JOF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JOF from S2C, [Save to disk] Re-refined 5jof structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JOF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jof] [5jof_A] [5jof_B] [5jof_C] [5jof_D] [5jof_E] [5jof_F] [5jof_H] [5jof_L] SWISS-PROT database: Domains found in 5JOF: [IG_like] [IGv ] by SMART

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