5JUM	Transferase Dna	date	May 10, 2016
title	Crystal Structure Of Human Dna Polymerase Eta Inserting Dctp N-(2'-Deoxyguanosin-8- Yl)-3-Aminobenzanthrone (C8-Dg-Aba)
authors	A.Patra, D.A.Politica, M.P.Stone, M.Egli
compound		source
Molecule: Dna Polymerase Eta Chain: A Synonym: Rad30 Homolog A,Xeroderma Pigmentosum Variant Type Ec: 2.7.7.7 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Polh, Rad30, Rad30a, Xpv Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Dna (5'-D(Captp(4e9)Paptpgpapcpgpcpt) Chain: T Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Chemically Synthesized
Molecule: Dna (5'-D(Apgpcpgptpcpapt)-3') Chain: P Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 Other_details: Chemically Synthesized
symmetry	Space Group: P 61	R_factor 0.166 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.117 99.117 81.690 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	4E9, CA, DCP, GOL	enzyme	Transferase E.C.2.7.7.7 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mechanism of Error-Free Bypass of the Environmental Carcinogen N-(2'-Deoxyguanosin-8-yl)-3-aminobenzanthrone Adduct by Human DNA Polymerase eta., Patra A, Politica DA, Chatterjee A, Tokarsky EJ, Suo Z, Basu AK, Stone MP, Egli M, Chembiochem. 2016 Nov 3;17(21):2033-2037. doi: 10.1002/cbic.201600420. Epub 2016 , Sep 13. PMID:27556902

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (5jum.pdb1.gz) 80 Kb LPC: Ligand-Protein Contacts for 5JUM CSU: Contacts of Structural Units for 5JUM Structure Factors (405 Kb) Retrieve 5JUM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JUM from S2C, [Save to disk] Re-refined 5jum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JUM in 3D

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Visual 3D analysis of 5JUM

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jum] [5jum_T] [5jum_P] [5jum_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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