5JXJ Hydrolase date May 13, 2016
title Structure Of The Proprotein Convertase Furin Complexed To Me Guanidinomethyl-Phac-Rvr-Amba In Presence Of Edta
authors S.O.Dahms, M.Arciniega, T.Steinmetzer, R.Huber, M.E.Than
compound source
Molecule: Furin
Chain: A
Synonym: Dibasic-Processing Enzyme,Paired Basic Amino Acid Cleaving Enzyme,Pace;
Ec: 3.4.21.75
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Furin, Fur, Pace, Pcsk3
Expression_system: Homo Sapiens
Expression_system_taxid: 9606

Molecule: 2uc-Arg-Val-Arg-00s
Chain: H
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 65 2 2
R_factor 0.167 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
132.080 132.080 155.642 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand 00S, 2UC, CA, CL, NA enzyme Hydrolase E.C.3.4.21.75 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the unliganded form of the proprotein convertase furin suggests activation by a substrate-induced mechanism., Dahms SO, Arciniega M, Steinmetzer T, Huber R, Than ME, Proc Natl Acad Sci U S A. 2016 Sep 19. pii: 201613630. PMID:27647913
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (5jxj.pdb1.gz) 86 Kb
  • LPC: Ligand-Protein Contacts for 5JXJ
  • CSU: Contacts of Structural Units for 5JXJ
  • Structure Factors (484 Kb)
  • Retrieve 5JXJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JXJ from S2C, [Save to disk]
  • Re-refined 5jxj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5JXJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5JXJ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5jxj from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jxj_H] [5jxj] [5jxj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5JXJ
  • Community annotation for 5JXJ at PDBWiki (http://pdbwiki.org)

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