OCA Atlas for 5K3Y

5K3Y

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

6Q4, TPO

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A
C, D

Primary reference

Pharmacological Profile of BI 847325, an Orally Bioavailable, ATP-competitive Inhibitor of MEK and Aurora Kinases., Sini P, Gurtler U, Zahn SK, Baumann C, Rudolph D, Baumgartinger R, Strauss E, Haslinger C, Tontsch-Grunt U, Waizenegger IC, Solca F, Bader G, Zoephel A, Treu M, Reiser U, Garin-Chesa P, Boehmelt G, Kraut N, Quant J, Adolf GR, Mol Cancer Ther. 2016 Aug 5. pii: molcanther.0066.2016. PMID:27496137

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk]

Biological Unit Coordinates (5k3y.pdb1.gz) 110 Kb

Biological Unit Coordinates (5k3y.pdb2.gz) 114 Kb

LPC: Ligand-Protein Contacts for 5K3Y

CSU: Contacts of Structural Units for 5K3Y

Structure Factors (2567 Kb)

Retrieve 5K3Y in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5K3Y from S2C, [Save to disk]

Re-refined 5k3y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5K3Y in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5k3y] [5k3y_A] [5k3y_B] [5k3y_C] [5k3y_D]

SWISS-PROT database:

Domain found in 5K3Y: [S_TKc ] by SMART

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