5K5J | Transcription Dna | date | May 23, 2016 |
||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
title | Homo Sapiens Ccctc-Binding Factor (Ctcf) Znf5-8 And Dna Comp Structure In Space Group P41212 | ||||||||||||||
authors | H.Hashimoto, X.Cheng | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Transcriptional Repressor Ctcf Chain: A Fragment: Unp Residues 378-489 Synonym: 11-Zinc Finger Protein,Ccctc-Binding Factor,Ctcfl Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ctcf Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-(De3)-Ril Codon Plus Expression_system_vector_type: Pgex-6p-1 Expression_system_plasmid: Pxc1199 | ||||||||||||||
Molecule: Dna (5'-D(Cpcpcptpgpcptpgpgpcpapapc) Chain: B Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
Molecule: Dna (5'-D(Tptpgpcpcpapgpcpapgpgpgpg) Chain: C Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||
symmetry | Space Group: P 41 21 2 |
| |||||||||||||
crystal cell |
| ||||||||||||||
method | X-Ray Diffraction | resolution | 2.29 Å | ||||||||||||
ligand | ACT, SO4, ZN | enzyme |
| ||||||||||||
Primary reference | Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA., Hashimoto H, Wang D, Horton JR, Zhang X, Corces VG, Cheng X, Mol Cell. 2017 Jun 1;66(5):711-720.e3. doi: 10.1016/j.molcel.2017.05.004. Epub, 2017 May 18. PMID:28529057 |
Data retrieval |
View 5K5J in 3D |
Visual 3D analysis of 5K5J |
Structure-derived information |
Sequence-derived information |
Other resources with information on 5K5J |
OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |