5K9K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
I, F


Primary referenceVaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses., Joyce MG, Wheatley AK, Thomas PV, Chuang GY, Soto C, Bailer RT, Druz A, Georgiev IS, Gillespie RA, Kanekiyo M, Kong WP, Leung K, Narpala SN, Prabhakaran MS, Yang ES, Zhang B, Zhang Y, Asokan M, Boyington JC, Bylund T, Darko S, Lees CR, Ransier A, Shen CH, Wang L, Whittle JR, Wu X, Yassine HM, Santos C, Matsuoka Y, Tsybovsky Y, Baxa U, Mullikin JC, Subbarao K, Douek DC, Graham BS, Koup RA, Ledgerwood JE, Roederer M, Shapiro L, Kwong PD, Mascola JR, McDermott AB, Cell. 2016 Jul 28;166(3):609-23. doi: 10.1016/j.cell.2016.06.043. Epub 2016 Jul, 21. PMID:27453470
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (638 Kb) [Save to disk]
  • Biological Unit Coordinates (5k9k.pdb1.gz) 313 Kb
  • Biological Unit Coordinates (5k9k.pdb2.gz) 316 Kb
  • LPC: Ligand-Protein Contacts for 5K9K
  • CSU: Contacts of Structural Units for 5K9K
  • Structure Factors (729 Kb)
  • Retrieve 5K9K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K9K from S2C, [Save to disk]
  • Re-refined 5k9k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5K9K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k9k] [5k9k_A] [5k9k_B] [5k9k_F] [5k9k_H] [5k9k_I] [5k9k_L]
  • SWISS-PROT database:

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