5KGF | Structural Protein Dna | date | Jun 13, 2016 |
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title | Structural Model Of 53bp1 Bound To A Ubiquitylated And Methy Nucleosome, At 4.5 A Resolution | ||||||||||||||||||||||
authors | M.D.Wilson, S.Benlekbir, F.Sicheri, J.L.Rubinstein, D.Durocher | ||||||||||||||||||||||
compound | source | ||||||||||||||||||||||
Molecule: Histone H3.2 Chain: A, E Synonym: Histone H3 Engineered: Yes |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Histone H4 Chain: B, F Synonym: Histone H4kc20me2 Engineered: Yes Mutation: Yes Other_details: Cysteine Alkylation At Position 20 |
Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Histone H2a Type 1 Chain: C, G Synonym: H2a.1, Histone H2ap Engineered: Yes Mutation: Yes Other_details: Isopeptide Amide Crosslink Between K15 Of H2 Of Ubiquitin; |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2ag, H2afp, Hist1h2ai, H2afc, Hist1h2ak, H2afd, Hist1h2al, H2afi, Hist1h2am, H2afn; Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Histone H2b Type 1-Cefgi Chain: D, H Synonym: Histone H2b.1 A, Histone H2b.A, H2ba, Histone H2b Histone H2b.H, H2bh, Histone H2b.K, H2bk, Histone H2b.L, Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hist1h2bc, H2bfl, Hist1h2be, H2bfh, Hist1h2bf, H2bfg, Hist1h2bg, H2bfa, Hist1h2bi, H2bfk; Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Dna (145-Mer) Chain: I Engineered: Yes |
Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Dna (145-Mer) Chain: J Engineered: Yes |
Organism_scientific: Synthetic Construct Organism_taxid: 32630 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Tumor Suppressor P53-Binding Protein 1 Chain: L, K Engineered: Yes Other_details: Full Protein Not Modeled |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tp53bp1 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
Molecule: Ubiquitin Chain: O, M Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ubb Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 4.54 Å | ||||||||||||||||||||
ligand | M2L | enzyme |
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Gene Ontology |
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Primary reference | The structural basis of modified nucleosome recognition by 53BP1., Wilson MD, Benlekbir S, Fradet-Turcotte A, Sherker A, Julien JP, McEwan A, Noordermeer SM, Sicheri F, Rubinstein JL, Durocher D, Nature. 2016 Aug 4;536(7614):100-3. PMID:27462807 |
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