5KGG Transferase Transferase Inhibitor date Jun 13, 2016
title Crystal Structure Of Pim1 With Inhibitor: 2-(5-Chloranyl-1~{ 3-Yl)Ethanamine
authors A.D.Ferguson
compound source
Molecule: Serinethreonine-Protein Kinase Pim-1
Chain: A
Fragment: Unp Residues 30-305
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pim1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65
R_factor 0.159 R_Free 0.170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.446 96.446 81.615 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.95 Å
ligand 6SO, CL, EDO, SO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (5kgg.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 5KGG
  • CSU: Contacts of Structural Units for 5KGG
  • Structure Factors (875 Kb)
  • Retrieve 5KGG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KGG from S2C, [Save to disk]
    • View 5KGG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5KGG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kgg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5KGG
  • Community annotation for 5KGG at PDBWiki (http://pdbwiki.org)

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