5KGS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6SR, PGE, PLP enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructure-Based Optimization of Pyridoxal 5'-Phosphate-Dependent Transaminase Enzyme (BioA) Inhibitors that Target Biotin Biosynthesis in Mycobacterium tuberculosis., Liu F, Dawadi S, Maize KM, Dai R, Park SW, Schnappinger D, Finzel BC, Aldrich CC, J Med Chem. 2017 Jul 13;60(13):5507-5520. doi: 10.1021/acs.jmedchem.7b00189. Epub, 2017 Jun 22. PMID:28594172
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (5kgs.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 5KGS
  • CSU: Contacts of Structural Units for 5KGS
  • Structure Factors (1054 Kb)
  • Retrieve 5KGS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KGS from S2C, [Save to disk]
  • Re-refined 5kgs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5KGS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kgs_A] [5kgs_B]
  • SWISS-PROT database:

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