5KJR		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DPR, MPD, MPT, NAG, NH2, U2X	enzyme
Gene Ontology	Chain Function Process Component G
Primary reference	A Highly Conserved gp120 Inner Domain Residue Modulates Env Conformation and Trimer Stability., Ding S, Tolbert WD, Prevost J, Pacheco B, Coutu M, Debbeche O, Xiang SH, Pazgier M, Finzi A, J Virol. 2016 Jul 6. pii: JVI.01068-16. PMID:27384653

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (254 Kb) [Save to disk] Biological Unit Coordinates (5kjr.pdb1.gz) 245 Kb LPC: Ligand-Protein Contacts for 5KJR CSU: Contacts of Structural Units for 5KJR Structure Factors (587 Kb) Retrieve 5KJR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KJR from S2C, [Save to disk] Re-refined 5kjr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KJR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kjr] [5kjr_G] [5kjr_H] [5kjr_L] [5kjr_N] SWISS-PROT database: Domains found in 5KJR: [IG_like] [IGv ] by SMART

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