5KS5 Transferase date Jul 07, 2016
title Structure Of The C-Terminal Helical Repeat Domain Of Elongat Kinase
authors A.Piserchio, N.Will, I.Snyder, S.B.Ferguson, D.H.Giles, K.N.Dalby
compound source
Molecule: Eukaryotic Elongation Factor 2 Kinase
Chain: A
Fragment: Unp Residues 627-725
Synonym: Eef-2k,Calciumcalmodulin-Dependent Eukaryotic Elo Factor 2 Kinase;
Ec: 2.7.11.20
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eef2k
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_cell_line: Bl21 (De3)
Expression_system_vector_type: Pet15b
Expression_system_plasmid: S3
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.11.20 BRENDA
Primary referenceStructure of the C-terminal Helical Repeat Domain of Eukaryotic Elongation Factor 2 Kinase., Will N, Piserchio A, Snyder I, Ferguson SB, Giles DH, Dalby KN, Ghose R, Biochemistry. 2016 Aug 29. PMID:27571275
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (577 Kb) [Save to disk]
  • Biological Unit Coordinates (5ks5.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 5KS5
  • Original NMR restraints for 5KS5 from PDB
  • Retrieve 5KS5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KS5 from S2C, [Save to disk]
    • View 5KS5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5KS5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ks5_A] [5ks5]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5KS5
  • Community annotation for 5KS5 at PDBWiki (http://pdbwiki.org)

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