5KSI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DG2, HEM, S1P	enzyme
Gene Ontology	Chain Function Process Component A, C peroxidase activity B, D peroxidase activity
Primary reference	Structural and Functional Insight of Sphingosine 1-Phosphate-Mediated Pathogenic Metabolic Reprogramming in Sickle Cell Disease., Sun K, D'Alessandro A, Ahmed MH, Zhang Y, Song A, Ko TP, Nemkov T, Reisz JA, Wu H, Adebiyi M, Peng Z, Gong J, Liu H, Huang A, Wen YE, Wen AQ, Berka V, Bogdanov MV, Abdulmalik O, Han L, Tsai AL, Idowu M, Juneja HS, Kellems RE, Dowhan W, Hansen KC, Safo MK, Xia Y, Sci Rep. 2017 Nov 10;7(1):15281. doi: 10.1038/s41598-017-13667-8. PMID:29127281

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk] Biological Unit Coordinates (5ksi.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 5KSI CSU: Contacts of Structural Units for 5KSI Structure Factors (1188 Kb) Retrieve 5KSI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KSI from S2C, [Save to disk] Re-refined 5ksi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KSI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ksi_A] [5ksi_B] [5ksi_C] [5ksi_D] SWISS-PROT database:

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