5KUE Transport Protein date Jul 13, 2016
title Human Semet Incorporated I141ml146m Mitochondrial Calcium U (Residues 72-189) Crystal Structure With Magnesium
authors C.Y.M.Mok, S.K.Lee, M.S.Junop, P.B.Stathopulos
compound source
Molecule: Calcium Uniporter Protein, Mitochondrial
Chain: A
Fragment: Unp Residues 72-189
Synonym: Coiled-Coil Domain-Containing Protein 109a
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mcu, C10orf42, Ccdc109a
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65
R_factor 0.201 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.500 55.500 69.020 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.50 Å
ligand EDO, MG, MSE, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Insights into Mitochondrial Calcium Uniporter Regulation by Divalent Cations., Lee SK, Shanmughapriya S, Mok MC, Dong Z, Tomar D, Carvalho E, Rajan S, Junop MS, Madesh M, Stathopulos PB, Cell Chem Biol. 2016 Aug 24. pii: S2451-9456(16)30242-2. doi:, 10.1016/j.chembiol.2016.07.012. PMID:27569754
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (5kue.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 5KUE
  • CSU: Contacts of Structural Units for 5KUE
  • Structure Factors (570 Kb)
  • Retrieve 5KUE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5KUE from S2C, [Save to disk]
  • Re-refined 5kue structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5KUE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5KUE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5kue] [5kue_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5KUE
  • Community annotation for 5KUE at PDBWiki (http://pdbwiki.org)

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