5KYF	Hydrolase	date	Jul 21, 2016
title	Crystal Structure Of Usp7 Catalytic Domain [L299a] Mutant In With Ubiquitin
authors	L.Rouge, A.Ozen
compound		source
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase 7 Chain: B Fragment: Unp Residues 192-538 Synonym: Deubiquitinating Enzyme 7,Herpesvirus-Associated U Specific Protease,Ubiquitin Thioesterase 7,Ubiquitin-Specif Processing Protease 7; Ec: 3.4.19.12 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Usp7, Hausp Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Polyubiquitin-B Chain: C Fragment: Unp Residues 1-76 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ubb Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.176 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.490 76.560 88.390 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.45 Å
ligand	GOL	enzyme	Hydrolase E.C.3.4.19.12 BRENDA
Gene Ontology	Chain Function Process Component B
Primary reference	Selectively Modulating Conformational States of USP7 Catalytic Domain for Activation., Ozen A, Rouge L, Bashore C, Hearn BR, Skelton NJ, Dueber EC, Structure. 2018 Jan 2;26(1):72-84.e7. doi: 10.1016/j.str.2017.11.010. Epub 2017, Dec 14. PMID:29249604

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (5kyf.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 5KYF CSU: Contacts of Structural Units for 5KYF Structure Factors (935 Kb) Retrieve 5KYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KYF from S2C, [Save to disk]

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kyf_C] [5kyf_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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