OCA Atlas for 5KZP

5KZP

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ACT, CA

enzyme

Primary reference

Structure-Based Design of Hepatitis C Virus Vaccines that Elicit Neutralizing Antibody Responses to a Conserved Epitope., Pierce BG, Boucher EN, Piepenbrink KH, Ejemel M, Rapp CA, Thomas WD Jr, Sundberg EJ, Weng Z, Wang Y, J Virol. 2017 Aug 9. pii: JVI.01032-17. doi: 10.1128/JVI.01032-17. PMID:28794021

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (613 Kb) [Save to disk]

Biological Unit Coordinates (5kzp.pdb1.gz) 155 Kb

Biological Unit Coordinates (5kzp.pdb2.gz) 157 Kb

Biological Unit Coordinates (5kzp.pdb3.gz) 155 Kb

Biological Unit Coordinates (5kzp.pdb4.gz) 155 Kb

LPC: Ligand-Protein Contacts for 5KZP

CSU: Contacts of Structural Units for 5KZP

Structure Factors (1076 Kb)

Retrieve 5KZP in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5KZP from S2C, [Save to disk]

Re-refined 5kzp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KZP in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5kzp_I] [5kzp_B] [5kzp_A] [5kzp_C] [5kzp_D] [5kzp_E] [5kzp_F] [5kzp_G] [5kzp_H] [5kzp_J] [5kzp_K] [5kzp_L]

SWISS-PROT database:

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