5L0M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Structural Investigation into Oct4 Regulation by Orphan Nuclear Receptors, Germ Cell Nuclear Factor (GCNF) and Liver Receptor Homolog-1 (LRH-1)., Weikum ER, Tuntland ML, Murphy MN, Ortlund EA, J Mol Biol. 2016 Oct 27. pii: S0022-2836(16)30451-X. doi:, 10.1016/j.jmb.2016.10.025. PMID:27984042
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (5l0m.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 5L0M
  • CSU: Contacts of Structural Units for 5L0M
  • Structure Factors (71 Kb)
  • Retrieve 5L0M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L0M from S2C, [Save to disk]
  • Re-refined 5l0m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5L0M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l0m] [5l0m_A] [5l0m_B] [5l0m_C]
  • SWISS-PROT database:
  • Domain found in 5L0M: [ZnF_C4 ] by SMART

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