5L5F		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BO2, CL, MG	enzyme
Gene Ontology	Chain Function Process Component A, O proteasome core complex, alp... B, P proteasome core complex, alp... C, Q D, R proteasome core complex, alp... E, S proteasome core complex, alp... H, V I, W endopeptidase activator acti... proteasome core complex, bet... K, Y L, Z M, a proteasome core complex, bet... T, F proteasome core complex, alp... U, G proteasome core complex, alp... X, J endopeptidase activator acti... proteasome core complex, bet... b, N proteasome core complex, bet...
Primary reference	A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta5i., Huber EM, Heinemeyer W, de Bruin G, Overkleeft HS, Groll M, EMBO J. 2016 Dec 1;35(23):2602-2613. Epub 2016 Oct 27. PMID:27789522

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2063 Kb) [Save to disk] Biological Unit Coordinates (5l5f.pdb1.gz) 2048 Kb LPC: Ligand-Protein Contacts for 5L5F CSU: Contacts of Structural Units for 5L5F Structure Factors (7667 Kb) Retrieve 5L5F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5L5F from S2C, [Save to disk] Re-refined 5l5f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5L5F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5l5f] [5l5f_A] [5l5f_B] [5l5f_C] [5l5f_D] [5l5f_E] [5l5f_F] [5l5f_G] [5l5f_H] [5l5f_I] [5l5f_J] [5l5f_K] [5l5f_L] [5l5f_M] [5l5f_N] [5l5f_O] [5l5f_P] [5l5f_Q] [5l5f_R] [5l5f_S] [5l5f_T] [5l5f_U] [5l5f_V] [5l5f_W] [5l5f_X] [5l5f_Y] [5l5f_Z] [5l5f_a] [5l5f_b] SWISS-PROT database: Domain found in 5L5F: [Proteasome_A_N ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---