5L5Y		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	3BV, CL, MES, MG	enzyme
Gene Ontology	Chain Function Process Component A, O proteasome core complex, alp... B, P proteasome core complex, alp... D, R proteasome core complex, alp... E, S proteasome core complex, alp... G, U proteasome core complex, alp... H, V, K, Y J, X endopeptidase activator acti... proteasome core complex, bet... M, a proteasome core complex, bet... N, b proteasome core complex, bet... Q, C T, F proteasome core complex, alp... W, I endopeptidase activator acti... proteasome core complex, bet... Z, L
Primary reference	A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta5i., Huber EM, Heinemeyer W, de Bruin G, Overkleeft HS, Groll M, EMBO J. 2016 Dec 1;35(23):2602-2613. Epub 2016 Oct 27. PMID:27789522

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2057 Kb) [Save to disk] Biological Unit Coordinates (5l5y.pdb1.gz) 2041 Kb LPC: Ligand-Protein Contacts for 5L5Y CSU: Contacts of Structural Units for 5L5Y Structure Factors (5872 Kb) Retrieve 5L5Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5L5Y from S2C, [Save to disk] Re-refined 5l5y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5L5Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5l5y_I] [5l5y_J] [5l5y_K] [5l5y_L] [5l5y_M] [5l5y_N] [5l5y] [5l5y_A] [5l5y_B] [5l5y_C] [5l5y_D] [5l5y_E] [5l5y_F] [5l5y_G] [5l5y_H] [5l5y_O] [5l5y_P] [5l5y_Q] [5l5y_R] [5l5y_S] [5l5y_T] [5l5y_U] [5l5y_V] [5l5y_W] [5l5y_X] [5l5y_Y] [5l5y_Z] [5l5y_a] [5l5y_b] SWISS-PROT database: Domain found in 5L5Y: [Proteasome_A_N ] by SMART

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