OCA Atlas for 5L8G

5L8G

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

Gene

RRU

Primary reference

Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments., He D, Hughes S, Vanden-Hehir S, Georgiev A, Altenbach K, Tarrant E, Mackay CL, Waldron KJ, Clarke DJ, Marles-Wright J, Elife. 2016 Aug 16;5. pii: e18972. doi: 10.7554/eLife.18972. PMID:27529188

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (835 Kb) [Save to disk]

Biological Unit Coordinates (5l8g.pdb1.gz) 281 Kb

Biological Unit Coordinates (5l8g.pdb2.gz) 277 Kb

Biological Unit Coordinates (5l8g.pdb3.gz) 275 Kb

LPC: Ligand-Protein Contacts for 5L8G

CSU: Contacts of Structural Units for 5L8G

Structure Factors (4427 Kb)

Retrieve 5L8G in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5L8G from S2C, [Save to disk]

Re-refined 5l8g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5L8G in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5l8g] [5l8g_A] [5l8g_B] [5l8g_C] [5l8g_D] [5l8g_E] [5l8g_F] [5l8g_G] [5l8g_H] [5l8g_I] [5l8g_J] [5l8g_K] [5l8g_L] [5l8g_M] [5l8g_N] [5l8g_O] [5l8g_P] [5l8g_Q] [5l8g_R] [5l8g_S] [5l8g_T] [5l8g_U] [5l8g_V] [5l8g_W] [5l8g_X] [5l8g_Y] [5l8g_Z] [5l8g_a] [5l8g_b] [5l8g_c] [5l8g_d]

SWISS-PROT database:

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