5L9V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MN, OGA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases., Chowdhury R, Leung IK, Tian YM, Abboud MI, Ge W, Domene C, Cantrelle FX, Landrieu I, Hardy AP, Pugh CW, Ratcliffe PJ, Claridge TD, Schofield CJ, Nat Commun. 2016 Aug 26;7:12673. doi: 10.1038/ncomms12673. PMID:27561929
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk]
  • Biological Unit Coordinates (5l9v.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (5l9v.pdb2.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 5L9V
  • CSU: Contacts of Structural Units for 5L9V
  • Structure Factors (658 Kb)
  • Retrieve 5L9V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5L9V from S2C, [Save to disk]
  • Re-refined 5l9v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5L9V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5l9v] [5l9v_A] [5l9v_B] [5l9v_C] [5l9v_D]
  • SWISS-PROT database:
  • Domain found in 5L9V: [P4Hc ] by SMART

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