5LDX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FES, FMN, NAP, SF4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


D


E


F


G


H


I


J


K


L


M


N


S


T, U


V


W


X


Y


a


b


c


d


e


f


i


m


n


o


q
  • electron transfer activity


  • Primary referenceStructure of mammalian respiratory complex I., Zhu J, Vinothkumar KR, Hirst J, Nature. 2016 Aug 18;536(7616):354-8. PMID:27509854
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1026 Kb) [Save to disk]
  • Biological Unit Coordinates (5ldx.pdb1.gz) 1004 Kb
  • LPC: Ligand-Protein Contacts for 5LDX
  • CSU: Contacts of Structural Units for 5LDX
  • Retrieve 5LDX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LDX from S2C, [Save to disk]
  • View 5LDX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ldx] [5ldx_A] [5ldx_B] [5ldx_C] [5ldx_D] [5ldx_E] [5ldx_F] [5ldx_G] [5ldx_H] [5ldx_I] [5ldx_J] [5ldx_K] [5ldx_L] [5ldx_M] [5ldx_N] [5ldx_O] [5ldx_P] [5ldx_Q] [5ldx_R] [5ldx_S] [5ldx_T] [5ldx_U] [5ldx_V] [5ldx_W] [5ldx_X] [5ldx_Y] [5ldx_Z] [5ldx_a] [5ldx_b] [5ldx_c] [5ldx_d] [5ldx_e] [5ldx_f] [5ldx_g] [5ldx_h] [5ldx_i] [5ldx_j] [5ldx_k] [5ldx_l] [5ldx_m] [5ldx_n] [5ldx_o] [5ldx_p] [5ldx_q] [5ldx_r] [5ldx_s]
  • SWISS-PROT database:
  • Domains found in 5LDX: [L51_S25_CI-B8] [NADH-G_4Fe-4S_3] [NADH_4Fe-4S ] by SMART

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