5LEY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, 6V1, 6V9, 6VA, CL, K, MG, OAS, YCM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, O


C, Q


D, R


K, Y


N, b, H, V


P, B


S, E


T, F


U, G
  • positive regulation of NF-ka...

    • W, I


    X, J


    Z, L


    a, M


    Primary referenceThe inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design., Schrader J, Henneberg F, Mata RA, Tittmann K, Schneider TR, Stark H, Bourenkov G, Chari A, Science. 2016 Aug 5;353(6299):594-8. doi: 10.1126/science.aaf8993. PMID:27493187
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2062 Kb) [Save to disk]
  • Biological Unit Coordinates (5ley.pdb1.gz) 2041 Kb
  • LPC: Ligand-Protein Contacts for 5LEY
  • CSU: Contacts of Structural Units for 5LEY
  • Structure Factors (8363 Kb)
  • Retrieve 5LEY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LEY from S2C, [Save to disk]
  • Re-refined 5ley structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LEY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ley_A] [5ley_B] [5ley_C] [5ley_D] [5ley_I] [5ley_J] [5ley_K] [5ley_L] [5ley_M] [5ley_N] [5ley_O] [5ley] [5ley_E] [5ley_F] [5ley_G] [5ley_H] [5ley_P] [5ley_Q] [5ley_R] [5ley_S] [5ley_T] [5ley_U] [5ley_V] [5ley_W] [5ley_X] [5ley_Y] [5ley_Z] [5ley_a] [5ley_b] [5ley_c] [5ley_d]
  • SWISS-PROT database:
  • Domain found in 5LEY: [Proteasome_A_N ] by SMART

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