5LF0 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, 6V1, 6VO, ACE, CL, IML, K, MG, YCM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, O


C, Q


D, R


G, U
  • positive regulation of NF-ka...

    • I, W


    K, Y


    N, V, b, H


    P, B


    S, E


    T, F


    X, J


    Z, L


    a, M


    Primary referenceThe inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design., Schrader J, Henneberg F, Mata RA, Tittmann K, Schneider TR, Stark H, Bourenkov G, Chari A, Science. 2016 Aug 5;353(6299):594-8. doi: 10.1126/science.aaf8993. PMID:27493187
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2088 Kb) [Save to disk]
  • Biological Unit Coordinates (5lf0.pdb1.gz) 2067 Kb
  • LPC: Ligand-Protein Contacts for 5LF0
  • CSU: Contacts of Structural Units for 5LF0
  • Structure Factors (2356 Kb)
  • Retrieve 5LF0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LF0 from S2C, [Save to disk]
  • Re-refined 5lf0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LF0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lf0] [5lf0_A] [5lf0_B] [5lf0_C] [5lf0_D] [5lf0_E] [5lf0_F] [5lf0_G] [5lf0_H] [5lf0_I] [5lf0_J] [5lf0_K] [5lf0_L] [5lf0_M] [5lf0_N] [5lf0_O] [5lf0_P] [5lf0_Q] [5lf0_R] [5lf0_S] [5lf0_T] [5lf0_U] [5lf0_V] [5lf0_W] [5lf0_X] [5lf0_Y] [5lf0_Z] [5lf0_a] [5lf0_b] [5lf0_c] [5lf0_d] [5lf0_e] [5lf0_f] [5lf0_g] [5lf0_h]
  • SWISS-PROT database:
  • Domain found in 5LF0: [Proteasome_A_N ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science