5LF6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1PE, 6V1, 6VF, CL, K, MG, NEN, PHQ, YCM enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, P


D, R


F, T


G, U
  • positive regulation of NF-ka...

    • I, W


    K, Y


    M, a


    N, b, V, H


    O, A


    Q, C


    S, E


    X, J


    Z, L


    Primary referenceThe inhibition mechanism of human 20S proteasomes enables next-generation inhibitor design., Schrader J, Henneberg F, Mata RA, Tittmann K, Schneider TR, Stark H, Bourenkov G, Chari A, Science. 2016 Aug 5;353(6299):594-8. doi: 10.1126/science.aaf8993. PMID:27493187
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2051 Kb) [Save to disk]
  • Biological Unit Coordinates (5lf6.pdb1.gz) 2031 Kb
  • LPC: Ligand-Protein Contacts for 5LF6
  • CSU: Contacts of Structural Units for 5LF6
  • Structure Factors (5126 Kb)
  • Retrieve 5LF6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5LF6 from S2C, [Save to disk]
  • Re-refined 5lf6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5LF6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5lf6] [5lf6_A] [5lf6_B] [5lf6_C] [5lf6_D] [5lf6_E] [5lf6_F] [5lf6_G] [5lf6_H] [5lf6_I] [5lf6_J] [5lf6_K] [5lf6_L] [5lf6_M] [5lf6_N] [5lf6_O] [5lf6_P] [5lf6_Q] [5lf6_R] [5lf6_S] [5lf6_T] [5lf6_U] [5lf6_V] [5lf6_W] [5lf6_X] [5lf6_Y] [5lf6_Z] [5lf6_a] [5lf6_b] [5lf6_c] [5lf6_d]
  • SWISS-PROT database:
  • Domain found in 5LF6: [Proteasome_A_N ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science