5LGE	Oxidoreductase	date	Jul 07, 2016
title	Crystal Structure Of Human Idh1 Mutant (R132h) In Complex Wi And An Inhibitor Related To Bay 1436032
authors	R.C.Hillig, U.Hars, I.P.Korndoerfer
compound		source
Molecule: Isocitrate Dehydrogenase [Nadp] Cytoplasmic Chain: A, B, C, D Synonym: Idh,Cytosolic Nadp-Isocitrate Dehydrogenase,Idp,Na Specific Icdh,Oxalosuccinate Decarboxylase; Ec: 1.1.1.42 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Idh1, Picd Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_variant: Ril Expression_system_plasmid: P10t7-2
symmetry	Space Group: C 1 2 1	R_factor 0.195 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.900 110.320 198.540 90.00 91.19 90.00
method	X-Ray Diffraction	resolution	2.70 Å
ligand	6VN, ACT, EDO, NAP	enzyme	Oxidoreductase E.C.1.1.1.42 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Pan-mutant IDH1 inhibitor BAY 1436032 for effective treatment of IDH1 mutant astrocytoma in vivo., Pusch S, Krausert S, Fischer V, Balss J, Ott M, Schrimpf D, Capper D, Sahm F, Eisel J, Beck AC, Jugold M, Eichwald V, Kaulfuss S, Panknin O, Rehwinkel H, Zimmermann K, Hillig RC, Guenther J, Toschi L, Neuhaus R, Haegebart A, Hess-Stumpp H, Bauser M, Wick W, Unterberg A, Herold-Mende C, Platten M, von Deimling A, Acta Neuropathol. 2017 Jan 25. doi: 10.1007/s00401-017-1677-y. PMID:28124097

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (566 Kb) [Save to disk] Biological Unit Coordinates (5lge.pdb1.gz) 279 Kb Biological Unit Coordinates (5lge.pdb2.gz) 283 Kb LPC: Ligand-Protein Contacts for 5LGE CSU: Contacts of Structural Units for 5LGE Structure Factors (1189 Kb) Retrieve 5LGE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5LGE from S2C, [Save to disk] Re-refined 5lge structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5lge] [5lge_D] [5lge_A] [5lge_B] [5lge_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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